Metagenomic Analysis

Metagenomics allows the characterization and quantification of the microbial communities present in a sample. This information has multiple clinical, biotechnological and environmental applications. In addition, to help you obtain the best results from your analysis, we offer a completely personalized consulting service, including scientific and technical advice.

From 16S gene variable regions sequencing or shotgun profiling data (Illumina or Ion Torrent technologies) we carry out metagenomics analysis including:

  • Data filtering and statistical quality control of the sequences.
  • Annotation based on assignment of OTUs (Operational Taxonomic Unit).
  • Quantify alpha and beta diversity.
  • Taxonomic classification and differential analysis.
  • Pathway prediction impact.

Results

For the advanced review of results, a detailed report is delivered through our web application genome one reportsData are shown in easily interpretable tables and graphs that can be exported in suitable formats for scientific publications.

You will have access to:

  • Quality control of the sequences .
  • Alpha diversity analysis (OTUs, Shannon Index, Faith’s Phylgenetic Diversity).
  • Beta diversity analysis (Bray Curtis Index, Jaccard Index, UNIFRAC Weighted Index, UNIFRAC Unweighted Index).
  • Taxonomic classification and differential analysis (taxonomic barplots, percentages, differential analysis, differential analysis plot).
  • Metabolic impact prediction (pathway enrichment plot and pathway enrichment table).

Metagenomic Analysis

Metagenomics allows the characterization and quantification of the microbial communities present in a sample. This information has multiple clinical, biotechnological and environmental applications. In addition, to help you obtain the best results from your analysis, we offer a completely personalized consulting service, including scientific and technical advice.

From 16S gene variable regions sequencing or shotgun profiling data (Illumina or Ion Torrent technologies) we carry out metagenomics analysis including:

  • Data filtering and statistical quality control of the sequences.
  • Annotation based on assignment of OTUs (Operational Taxonomic Unit).
  • Quantify alpha and beta diversity.
  • Taxonomic classification and differential analysis.
  • Pathway prediction impact.

Results

For the advanced review of results, a detailed report is delivered through our web application genome one reportsData are shown in easily interpretable tables and graphs that can be exported in suitable formats for scientific publications.

You will have access to:

  • Quality control of the sequences .
  • Alpha diversity analysis (OTUs, Shannon Index, Faith’s Phylgenetic Diversity).
  • Beta diversity analysis (Bray Curtis Index, Jaccard Index, UNIFRAC Weighted Index, UNIFRAC Unweighted Index).
  • Taxonomic classification and differential analysis (taxonomic barplots, percentages, differential analysis, differential analysis plot).
  • Metabolic impact prediction (pathway enrichment plot and pathway enrichment table).

Any question?

We are at your complete disposal to resolve any questions you may have.

Please, get in touch via the attached form or call us at the following phone number.