Metagenomic analysis
Beyond classical microbiology
Home " Metagenomics
Metagenomic analysis
Metagenomics allows the characterisation and quantification of microbial communities present in samples of very diverse nature. In the field of human health, its implication in different diseases is currently attracting enormous interest from the scientific community.
Our bioinformatics analysis of 16S, 18S and COI variable regions (Illumina technology) includes:
- Data filtering and statistical quality checks of the sequences.
- Annotation based on OTU (Operational Taxonomic Unit) allocation.
- Calculation of alpha and beta diversity.
- Taxonomic classification and differential analysis.
- Prediction of contribution to biological and metabolic pathways.
We deliver the results through our platform Genome One Reports from which you will have access to:
- Quality analysis of the sequences obtained.
- Alpha diversity analysis (OTUs, Shannon Index, Faith's Phylgenetic Diversity).
- Beta diversity analysis (Bray Curtis Index, Jaccard Index, UNIFRAC Weighted Index, UNIFRAC Unweighted Index).
- Taxonomic classification and differential analysis (taxonomic barplots, percentages, differential analysis, differential analysis plot).
- Prediction of metabolic impact (pathway enrichment plot and pathway enrichment table).
Our service
Advice
We help our clients to choose the best conditions for their study.
Sample preparation
We can take care of all the necessary steps prior to bioinformatics analysis.
Bioinformatics analysis
We carry out the bioinformatics analysis with our Genome One software.
Results
We deliver results through our Genome One Reports web platform.
Metagenomic analysis
Beyond classical microbiology
Home " Metagenomics
Metagenomic analysis
Metagenomics allows the characterisation and quantification of microbial communities present in samples of very diverse nature. In the field of human health, its implication in different diseases is currently attracting enormous interest from the scientific community.
Our bioinformatics analysis of 16S, 18S and COI variable regions (Illumina technology) includes:
- Data filtering and statistical quality checks of the sequences.
- Annotation based on OTU (Operational Taxonomic Unit) allocation.
- Calculation of alpha and beta diversity.
- Taxonomic classification and differential analysis.
- Prediction of contribution to biological and metabolic pathways.
We deliver the results through our platform Genome One Reports from which you will have access to:
- Quality analysis of the sequences obtained.
- Alpha diversity analysis (OTUs, Shannon Index, Faith's Phylgenetic Diversity).
- Beta diversity analysis (Bray Curtis Index, Jaccard Index, UNIFRAC Weighted Index, UNIFRAC Unweighted Index).
- Taxonomic classification and differential analysis (taxonomic barplots, percentages, differential analysis, differential analysis plot).
- Prediction of metabolic impact (pathway enrichment plot and pathway enrichment table).
Our service
Advice
We help our clients to choose the best conditions for their study.
Sample preparation
We can take care of all the necessary steps prior to bioinformatics analysis.
Bioinformatics analysis
We carry out the bioinformatics analysis with our Genome one software.
Delivery of results
We deliver results through our web platform Genome one Reports.
Metagenomic analysis
Beyond classical microbiology
Home " Metagenomics
Metagenomic analysis
Metagenomics allows the characterisation and quantification of microbial communities present in samples of very diverse nature. In the field of human health, its implication in different diseases is currently attracting enormous interest from the scientific community.
Our bioinformatics analysis of 16S, 18S and COI variable regions (Illumina technology) includes:
- Data filtering and statistical quality checks of the sequences.
- Annotation based on OTU (Operational Taxonomic Unit) allocation.
- Calculation of alpha and beta diversity.
- Taxonomic classification and differential analysis.
- Prediction of contribution to biological and metabolic pathways.
We deliver the results through our platform Genome One Reports from which you will have access to:
- Quality analysis of the sequences obtained.
- Alpha diversity analysis (OTUs, Shannon Index, Faith's Phylgenetic Diversity).
- Beta diversity analysis (Bray Curtis Index, Jaccard Index, UNIFRAC Weighted Index, UNIFRAC Unweighted Index).
- Taxonomic classification and differential analysis (taxonomic barplots, percentages, differential analysis, differential analysis plot).
- Prediction of metabolic impact (pathway enrichment plot and pathway enrichment table).
Our service
Advice
We help our clients to choose the best conditions for their study.
Sample preparation
We can take care of all the necessary steps prior to bioinformatics analysis.
Bioinformatics analysis
We carry out the bioinformatics analysis with our Genome one software.
Delivery of results
We deliver results through our web platform Genome one Reports.